Prostate Cancer Additional Data

Prostate Cancer

Integrative genomic profiling of human prostate cancer:
Genomic data

Data files:

The full raw data is available via GEO, accession GSE21032.

Processed data in flat file format can be downloaded below. See the manuscript for all details on data analysis.

Visualization of copy-number profiles in IGV:

Integrative Genomics Viewer (IGV)This link will start the Integrative Genomics Viewer (IGV) and display the copy-number data.

[IGV Home] [IGV Documentation]

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Data Portal

Explore cancer genomics data via the cBio Cancer Genomics Portal.


The CGDS R-package has been released.

NetBox version 1 has been released.

The Cancer Genome Atlas has announced the selection of six Genome Data Analysis Centers.


Mutual exclusivity analysis identifies oncogenic network modules. Genome Res. 2011 Sep 9. [Abstract] [PDF]

Integrated genomic analyses of ovarian carcinoma. Nature. 2011 Jun 29. [Abstract] [Full Text] [PDF]

Pathway Commons, a web resource for biological pathway data. Nucleic Acids Res.. 2011 Jan (Database issue). [Abstract] [Full Text] [PDF]

Gene Ranker

Explore cancer genes with Gene Ranker.