Gene Ranker: TCGA GBM 6000

File Format:

Gene Ranker can import new gene lists, which adhere to the following format.

Required header information:

!code = [short internal code, no spaces, used to identify the source.  For example:  VOGELSTEIN]
!label = [short label, displayed to the user]
!description = [description of source;  can be specified in HTML, if you want bold, italics, etc.]
!default_score = [default score; numeric double value]

Gene lists:

gene [tab] comment

gene = [must be an official gene symbol, or an entrez gene ID]
comment = [any comment specific to the gene, not required]

Example

!code = MCM_ASSOCIATED
!label = MCM Associated Genes
!description = List of known MCM associated genes.  
!default_score = 5.0
MCM2
MCM4    Chaos3 Mutant
MCM3
MCM5
MCM6
MCM7
MCM10
CDT1
CDC6
DBF4